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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013604.1_2497_2915_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2497 - 2915

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGGCTCCA

5'SS Class:

weak_major

3'SS Sequence:

GAGCCCCAGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTGAG

U12 Branch Point Sequence:

AGCACCCTACCT

Flanking Amino Acid:

LRWDAAFHIFAPSPPRSCPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

51.2

41.5

Major BPS

48.4

-0.1

1.5

39.9

Major PPT

41.8

-0.4

1.7

40.1

39.2

Minor 5ss

33.3

-1.9

3.1

38.7

41.6

Minor BPS

47.3

-0.1

64.82

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017200

Chromosome:

PEDO01013604.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025605

1689 - 3424

1736