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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013604.1_400_648_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

400 - 648

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCACAAGGG

5'SS Class:

weak_major

3'SS Sequence:

TGCAGGATCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCCAC

U12 Branch Point Sequence:

TCCATCCCACCC

Flanking Amino Acid:

EPPRPPGPGEAGLRLAPLSP

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.3

48.9

43.9

Major BPS

53.6

0.09

1.2

64.1

33.9

Major PPT

58.2

0.18

46.6

44.7

Minor 5ss

17.3

-3.8

3.9

20.4

37.6

Minor BPS

39.8

-0.7

47.18

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017013

Chromosome:

PEDO01013604.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025466

5 - 1376

1372