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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013617.1_1194_1282_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1194 - 1282

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

CCCGGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAG

U12 Branch Point Sequence:

GGCCGCGTACCT

Flanking Amino Acid:

LQQQLEAIRGRLPQLAAAIG

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

43.3

-0.4

1.6

52.1

45.2

Major PPT

68.7

0.42

0.9

60.8

35.2

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

-0.7

2.4

54.47

46.8

Associated Gene:

Gene:

TRIM3

Ensembl Gene ID:

ENSAPLG00000029001

Chromosome:

PEDO01013617.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019138

11 - 3840

3830