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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013617.1_138_174_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

138 - 174

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGAGGCCG

5'SS Class:

major

3'SS Sequence:

GCGCCGCTGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GCGCCGCTGACA

Flanking Amino Acid:

LIFRVGEPWWCCVSPPQGAA

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

59.3

39.6

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

0.14

1.1

48.9

39.4

Minor 5ss

15.4

-4

3.5

18.7

Minor BPS

41.7

-0.6

2.2

49.31

41.5

Associated Gene:

Gene:

TRIM3

Ensembl Gene ID:

ENSAPLG00000029001

Chromosome:

PEDO01013617.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019138

11 - 3840

3830