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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013617.1_1435_1499_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1435 - 1499

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCGC

5'SS Class:

major

3'SS Sequence:

GCCGGTGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAT

U12 Branch Point Sequence:

GGGGCCCTGAGT

Flanking Amino Acid:

PLSCPNHEGKVMEFYCESCE

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.1

43.4

Major BPS

53.7

0.09

1.4

46.5

Major PPT

57.4

0.17

49.1

39.3

Minor 5ss

27.7

-2.6

35.1

41.4

Minor BPS

-0.3

57.27

45.3

Associated Gene:

Gene:

TRIM3

Ensembl Gene ID:

ENSAPLG00000029001

Chromosome:

PEDO01013617.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019138

11 - 3840

3830