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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013617.1_1738_3709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1738 - 3709

Intron Length:

1972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGGCCCTGACCC

Flanking Amino Acid:

VLPCLHTFCERCLQNYIPPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

70.4

0.46

0.9

61.4

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

50.1

-0

1.8

61.79

Associated Gene:

Gene:

TRIM3

Ensembl Gene ID:

ENSAPLG00000029001

Chromosome:

PEDO01013617.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019138

11 - 3840

3830