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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013664.1_239_487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

239 - 487

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGGC

5'SS Class:

major

3'SS Sequence:

TCCCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CTGCCAGTAACC

Flanking Amino Acid:

DGELKSIHIDGVPDDMALGL

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

0.9

62.1

36.9

Major BPS

54.4

0.11

1.2

36.4

Major PPT

68.3

0.41

0.8

61.3

29.1

Minor 5ss

25.5

-2.8

3.2

29.5

37.3

Minor BPS

46.8

-0.2

2.3

60.8

44.2

Associated Gene:

Gene:

DNAJB2

Ensembl Gene ID:

ENSAPLG00000026741

Chromosome:

PEDO01013664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045337

21 - 2292

2272