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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_1864_1985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1864 - 1985

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCACAA

U12 Branch Point Sequence:

AGCACAAGAGCT

Flanking Amino Acid:

NVDIINFGEEEANTDKLTAF

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.6

33.4

Major BPS

47.8

-0.1

52.7

34.2

Major PPT

65.2

0.34

0.8

57.2

33.4

Minor 5ss

34.2

-1.8

3.2

47.6

47.9

Minor BPS

37.7

-0.8

1.9

51.81

41.5

Associated Gene:

Gene:

PSMD4

Ensembl Gene ID:

ENSAPLG00000002002

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023454

463 - 3463

3001

ENSAPLT00000002003

529 - 3464

2936