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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_2055_2370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2055 - 2370

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAG

U12 Branch Point Sequence:

CAGTCAGCAGCT

Flanking Amino Acid:

GSPVEDNEKDLVKLAKRLKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.9

34.9

Major BPS

46.3

-0.2

1.6

52.7

43.2

Major PPT

83.4

0.75

0.8

77.3

31.4

Minor 5ss

34.4

-1.8

2.9

41.7

Minor BPS

37.9

-0.8

2.4

54.55

46.6

Associated Gene:

Gene:

PSMD4

Ensembl Gene ID:

ENSAPLG00000002002

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002003

529 - 3464

2936

ENSAPLT00000023454

463 - 3463

3001