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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_2458_3240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2458 - 3240

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGCGGT

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

TTCTTGTTCAGT

Flanking Amino Acid:

TFCTGIRVAHLALKHRQGKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

67.1

44.6

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

88.5

0.87

0.7

84.9

29.9

Minor 5ss

39.4

-1.2

3.4

54.7

43.3

Minor BPS

-0.3

2.6

70.32

47.1

Associated Gene:

Gene:

PSMD4

Ensembl Gene ID:

ENSAPLG00000002002

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023454

463 - 3463

3001

ENSAPLT00000002003

529 - 3464

2936