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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_697_816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

697 - 816

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CGCCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGCC

U12 Branch Point Sequence:

GCCCCCCCCCCC

Flanking Amino Acid:

AAMDTSEPPKEEDDYDVMQD

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

21.4

-1.8

3.9

32.1

34.8

Major PPT

61.8

0.27

0.9

53.6

Minor 5ss

25.6

-2.8

30.2

Minor BPS

25.9

-1.9

3.4

37.35

40.2

Associated Gene:

Gene:

PSMD4

Ensembl Gene ID:

ENSAPLG00000002002

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023454

463 - 3463

3001

ENSAPLT00000002003

529 - 3464

2936