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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_707_832_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

707 - 832

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCGGCGGGC

5'SS Class:

weak_major

3'SS Sequence:

GGGCGGCTCCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCGGCCTCACCT

Flanking Amino Acid:

SRRSRPPPAGRCPWPRRRPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.3

52.3

39.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

43.2

-0.3

1.7

34.6

41.1

Minor 5ss

18.4

-3.6

4.2

30.8

43.7

Minor BPS

46.3

-0.2

59.2

49.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018358

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017430

447 - 1751

1305