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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013696.1_885_1022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

885 - 1022

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCGTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

CGGGTCCCACCC

Flanking Amino Acid:

YAMQMSLQGAEFAQAEAVEA

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

71.4

0.48

0.8

64.9

30.7

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

36.4

-1

1.9

38.97

Associated Gene:

Gene:

PSMD4

Ensembl Gene ID:

ENSAPLG00000002002

Chromosome:

PEDO01013696.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023454

463 - 3463

3001

ENSAPLT00000002003

529 - 3464

2936