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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013728.1_1467_1740_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1467 - 1740

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGCAGGGT

5'SS Class:

weak_major

3'SS Sequence:

CAGCGAAATGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

ATAGTTTAAACA

Flanking Amino Acid:

VVINTKAEQVIILYIGLRAQ

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.1

51.1

Major BPS

72.4

0.56

79.3

29.5

Major PPT

42.7

-0.4

1.7

36.8

38.4

Minor 5ss

25.5

-2.8

3.7

36.8

45.7

Minor BPS

50.1

1.7

61.43

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025235

Chromosome:

PEDO01013728.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042129

463 - 2159

1697