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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013751.1_714_996_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

714 - 996

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTATCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTGTGCTTATCC

Flanking Amino Acid:

SGHLLVCFSSGYFIHDSLDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

72.3

0.5

0.9

65.1

36.1

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

0.1

2.1

66.87

44.7

Associated Gene:

Gene:

TLCD1

Ensembl Gene ID:

ENSAPLG00000023285

Chromosome:

PEDO01013751.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026289

208 - 1862

1655