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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013775.1_6010_6100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6010 - 6100

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

CCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGGGAT

U12 Branch Point Sequence:

GCTGCAGGGATC

Flanking Amino Acid:

NFAPVINQVAGTAAQVTDGS

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.8

40.2

Major BPS

44.5

-0.3

1.4

38.4

41.7

Major PPT

68.4

0.42

0.9

61.3

35.1

Minor 5ss

34.8

-1.7

2.8

36.3

40.5

Minor BPS

36.5

-1

2.2

43.67

38.3

Associated Gene:

Gene:

CPNE9

Ensembl Gene ID:

ENSAPLG00000022546

Chromosome:

PEDO01013775.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044647

5022 - 9286

4265