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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013775.1_7234_7318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7234 - 7318

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAC

U12 Branch Point Sequence:

CGTGCCACACGC

Flanking Amino Acid:

IDVYDWDRDGSHDFIGEFAT

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

-0.3

1.1

48.6

36.6

Major PPT

69.1

0.43

0.8

61.8

28.8

Minor 5ss

25.6

-2.8

30.2

Minor BPS

36.4

-1

2.1

43.78

43.8

Associated Gene:

Gene:

CPNE9

Ensembl Gene ID:

ENSAPLG00000022546

Chromosome:

PEDO01013775.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044647

5022 - 9286

4265