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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013775.1_8417_8888_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8417 - 8888

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-CG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCGGGGCG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

CCAGGTTTAACA

Flanking Amino Acid:

DSKSCSIYKQQDFLGQAFVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

29.5

-1.1

3.3

41.5

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

48.6

-0.1

1.9

54.94

44.5

Associated Gene:

Gene:

CPNE9

Ensembl Gene ID:

ENSAPLG00000022546

Chromosome:

PEDO01013775.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044647

5022 - 9286

4265