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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013823.1_843_948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

843 - 948

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

TATCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CTGCTCTGAGCT

Flanking Amino Acid:

EYNPTDDRPSRADQFEYVMY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

0.59

0.9

69.7

36.3

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

48.8

-0

1.7

65.85

44.6

Associated Gene:

Gene:

POLR2H

Ensembl Gene ID:

ENSAPLG00000016577

Chromosome:

PEDO01013823.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042450

729 - 1148

420