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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013870.1_4002_6261_R

Intron Information:

Intron Rank:

153498

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002 - 6261

Intron Length:

2260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAGCT

5'SS Class:

major

3'SS Sequence:

CTTTCTGCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTTTCTGCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

63.4

41.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

73.3

0.53

0.9

66.6

39.4

Minor 5ss

37.2

-1.4

3.7

56.9

47.4

Minor BPS

55.9

0.17

1.9

70.43

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030059

Chromosome:

PEDO01013870.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041150

2254 - 6698

4445