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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013878.1_1109_1191_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1109 - 1191

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CCCTCCTGAGCC

Flanking Amino Acid:

DCSLCGLPCEGPDSAPLQCP

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

0.38

0.8

57.3

33.4

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

0.01

1.8

58.78

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030249

Chromosome:

PEDO01013878.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022379

21 - 1561

1541