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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013878.1_1323_1541_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1323 - 1541

Intron Length:

219

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CAACCACCAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATTTAC

U12 Branch Point Sequence:

TACCCGGCAACC

Flanking Amino Acid:

ELLPLRGACPGCQQDVL

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

0.27

1.2

55.4

41.7

Major PPT

0.13

48.8

33.7

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

39.6

-0.8

2.6

53.14

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030249

Chromosome:

PEDO01013878.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022379

21 - 1561

1541