Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013886.1_135_214_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

135 - 214

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGGCCC

5'SS Class:

major

3'SS Sequence:

TGCCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTTAT

U12 Branch Point Sequence:

TGTGCGTTATCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

64.4

38.3

Major BPS

0.03

1.4

45.3

47.5

Major PPT

67.9

0.4

0.8

58.1

33.2

Minor 5ss

27.4

-2.6

34.5

41.3

Minor BPS

49.9

0.08

2.4

76.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025596

Chromosome:

PEDO01013886.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042962

21 - 1444

1424

ENSAPLT00000028617

21 - 1444

1424