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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013902.1_3340_3824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3340 - 3824

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCATTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGTTTTGCATT

Flanking Amino Acid:

TRKPLVQTTPRLVYKWFLLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.1

68.2

42.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.8

0.74

0.9

80.3

37.1

Minor 5ss

28.4

-2.5

2.9

32.7

Minor BPS

1.9

71.5

40.5

Associated Gene:

Gene:

RNF121

Ensembl Gene ID:

ENSAPLG00000013169

Chromosome:

PEDO01013902.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013729

21 - 6522

6502