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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013902.1_4870_5591_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4870 - 5591

Intron Length:

722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CGCCCCTCAGTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

72.6

0.51

41.2

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

-0.3

1.8

48.76

41.4

Associated Gene:

Gene:

RNF121

Ensembl Gene ID:

ENSAPLG00000013169

Chromosome:

PEDO01013902.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013729

21 - 6522

6502