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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013913.1_538_636_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

538 - 636

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

CCCAAAAAGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTCGCCCCAAAA

Flanking Amino Acid:

RLLLPLRPQHRLTKASRVVV

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

48.6

-0

1.1

36.8

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

46.4

-0.2

61.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026308

Chromosome:

PEDO01013913.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028944

21 - 1174

1154