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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013957.1_1196_1295_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1196 - 1295

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

GCCGTGCCCGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

GGACCCGCAGCC

Flanking Amino Acid:

ISDNPGQHEVGEPEFRYVAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

66.9

39.9

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

57.5

0.17

0.9

50.1

34.2

Minor 5ss

32.4

-2

3.3

Minor BPS

39.4

-0.8

2.2

47.26

41.1

Associated Gene:

Gene:

CPXM1

Ensembl Gene ID:

ENSAPLG00000024861

Chromosome:

PEDO01013957.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036101

21 - 2845

2825