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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013957.1_771_869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

771 - 869

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGCC

5'SS Class:

major

3'SS Sequence:

CGGCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCCCTCTCACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

62.1

38.4

Major BPS

72.7

0.56

30.1

Major PPT

65.2

0.34

0.9

33.2

Minor 5ss

30.8

-2.2

3.5

41.3

45.5

Minor BPS

43.7

-0.6

2.1

48.75

45.1

Associated Gene:

Gene:

CPXM1

Ensembl Gene ID:

ENSAPLG00000024861

Chromosome:

PEDO01013957.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036101

21 - 2845

2825