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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013960.1_258_986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

258 - 986

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAAAAT

U12 Branch Point Sequence:

TTGCCCAAAATA

Flanking Amino Acid:

EVNVYGVSVPGCEGKCGMAA

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

48.3

-0.1

1.2

53.2

37.3

Major PPT

68.7

0.42

0.9

61.5

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

49.5

-0

1.9

65.66

Associated Gene:

Gene:

SLC27A5

Ensembl Gene ID:

ENSAPLG00000001898

Chromosome:

PEDO01013960.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001958

127 - 3679

3553