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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013961.1_1704_1952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1704 - 1952

Intron Length:

249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAC

U12 Branch Point Sequence:

CCGGCTACAAAC

Flanking Amino Acid:

IGAQADSDGQYVASCSNIGS

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

59.6

0.24

65.2

28.2

Major PPT

76.4

0.59

0.7

69.6

31.2

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

-0.8

1.8

39.96

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009435

Chromosome:

PEDO01013961.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038009

1535 - 4508

2974

ENSAPLT00000009882

1535 - 4965

3431