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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013961.1_4420_4909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4420 - 4909

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

TCCTTGCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAC

U12 Branch Point Sequence:

CCACACTGACCT

Flanking Amino Acid:

VCLHLSEGLLRIPLKKGKSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

60.1

0.25

1.4

71.3

36.7

Major PPT

73.9

0.54

68.5

37.3

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

43.7

-0.3

1.9

56.18

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009435

Chromosome:

PEDO01013961.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009882

1535 - 4965

3431