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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013992.1_11983_17627_F

Intron Information:

Intron Rank:

129085

Intron Class:

major

Intron Phase:

Intron Coordinates:

11983 - 17627

Intron Length:

5645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGAATTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCATTCTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

77.2

41.6

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

66.3

0.59

1.4

77.16

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019437

Chromosome:

PEDO01013992.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041115

7121 - 18086

10966