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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013992.1_3859_5899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3859 - 5899

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCGTGGTGAAGG

Flanking Amino Acid:

NCVTVLEKAQSMPGDMDYNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

37.5

-1

2.5

43.2

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030588

Chromosome:

PEDO01013992.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034481

2101 - 6009

3909