Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013995.1_1726_1938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1726 - 1938

Intron Length:

213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGCGGC

5'SS Class:

major

3'SS Sequence:

CTCCTGCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGCTCCTGCACC

Flanking Amino Acid:

CFRIHHYAGKVTYNVTGFIE

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.3

54.5

44.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

66.2

0.36

0.9

57.5

37.7

Minor 5ss

38.2

-1.3

3.2

50.6

Minor BPS

55.7

0.16

68.01

43.3

Associated Gene:

Gene:

MYO1A

Ensembl Gene ID:

ENSAPLG00000026849

Chromosome:

PEDO01013995.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032136

72 - 3603

3532