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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014011.1_2125_2203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2125 - 2203

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGGAT

U12 Branch Point Sequence:

CTGGCCCCACGG

Flanking Amino Acid:

PALQRQSGHRGGAP*

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

41.9

-0.5

1.5

33.4

42.7

Major PPT

70.8

0.47

0.9

64.1

31.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

34.1

-1.3

2.1

35.38

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029757

Chromosome:

PEDO01014011.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042636

21 - 2217

2197