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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014022.1_60_473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

60 - 473

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCAGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

CCCTTCTCCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

36.3

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

66.5

0.37

58.7

41.8

Minor 5ss

37.8

-1.4

3.3

51.1

45.6

Minor BPS

45.7

-0.2

1.9

58.48

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023496

Chromosome:

PEDO01014022.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034770

21 - 4665

4645