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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014075.1_49093_52580_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49093 - 52580

Intron Length:

3488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

AATTATGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TCTTCCAGAAAT

Flanking Amino Acid:

REWLGIAWLLVSVTQQEGQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

75.8

35.2

Major BPS

68.1

0.45

58.1

38.5

Major PPT

55.7

0.13

1.2

50.9

46.9

Minor 5ss

35.7

-1.6

45.4

43.9

Minor BPS

57.8

0.32

1.9

79.58

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027408

Chromosome:

PEDO01014075.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036858

48997 - 52892

3896