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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014095.1_2407_2677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2407 - 2677

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAA

U12 Branch Point Sequence:

TGTGGGACGACC

Flanking Amino Acid:

KKTLNPEFNEEFFYDIKHSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

62.3

0.31

1.1

54.9

40.8

Major PPT

85.6

0.8

0.7

80.2

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

33.5

-1.3

2.5

47.53

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020058

Chromosome:

PEDO01014095.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039941

2022 - 2815

794