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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014118.1_1069_1238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1069 - 1238

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

GTGAGGGTGACA

Flanking Amino Acid:

SNATTKFVSENKTLPIEDTT

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

-0.1

1.6

46.5

Major PPT

73.5

0.53

0.9

37.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

35.2

-1.1

2.7

47.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028316

Chromosome:

PEDO01014118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035952

21 - 3260

3240

ENSAPLT00000030625

21 - 2639

2619

ENSAPLT00000048202

240 - 3260

3021

ENSAPLT00000023085

240 - 2639

2400

ENSAPLT00000043735

702 - 4512

3811

ENSAPLT00000037441

240 - 4512

4273