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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014118.1_2148_2213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2148 - 2213

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

TCGGGGTGACCC

Flanking Amino Acid:

YTGAGQEIREAIQNPGDLRL

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

67.8

0.4

0.8

29.2

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

34.1

-1.2

2.4

41.89

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028316

Chromosome:

PEDO01014118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048202

240 - 3260

3021

ENSAPLT00000043735

702 - 4512

3811

ENSAPLT00000035952

21 - 3260

3240