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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014118.1_2764_3916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2764 - 3916

Intron Length:

1153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

TGTTTCTTCTCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

63.6

0.34

65.3

32.1

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

45.3

-0.2

3.6

80.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028316

Chromosome:

PEDO01014118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043735

702 - 4512

3811

ENSAPLT00000037441

240 - 4512

4273