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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014118.1_3998_4089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3998 - 4089

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

TGCTGTTCCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

49.8

-0

1.4

64.2

Major PPT

77.4

0.62

0.9

76.7

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

44.1

-0.3

2.3

64.22

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028316

Chromosome:

PEDO01014118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043735

702 - 4512

3811