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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014118.1_423_515_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

423 - 515

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CGCCAACCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTGAC

U12 Branch Point Sequence:

CCGTCGCCAACC

Flanking Amino Acid:

TSTEGLLNALRYTTRHLNDD

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.9

-0

1.3

40.5

41.4

Major PPT

59.2

0.21

0.9

50.6

32.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

41.1

-0.6

2.4

50.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028316

Chromosome:

PEDO01014118.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048202

240 - 3260

3021

ENSAPLT00000023085

240 - 2639

2400