Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014123.1_444_863_R

Intron Information:

Intron Rank:

133108

Intron Class:

major

Intron Phase:

Intron Coordinates:

444 - 863

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GACTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGACAT

U12 Branch Point Sequence:

TCTGCTTTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.9

82.7

29.3

Major BPS

67.6

0.44

1.2

Major PPT

69.2

0.43

0.9

62.3

34.3

Minor 5ss

17.3

-3.8

3.5

25.7

Minor BPS

71.4

0.76

1.4

82.48

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018847

Chromosome:

PEDO01014123.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025542

241 - 3480

3240