Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014128.1_668_750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

668 - 750

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCCCA

5'SS Class:

major

3'SS Sequence:

TAATTTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

ATGGCCCTAATT

Flanking Amino Acid:

SLPQPGLFSWEPQSNLIPIV

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

58.5

42.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

77.5

0.62

0.9

40.9

Minor 5ss

32.3

-2

2.9

31.7

42.2

Minor BPS

58.5

0.34

1.8

74.88

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025591

Chromosome:

PEDO01014128.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043664

172 - 1820

1649

ENSAPLT00000040783

381 - 1820

1440

ENSAPLT00000027479

441 - 1790

1350