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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014130.1_2391_2459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2391 - 2459

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACCCAC

U12 Branch Point Sequence:

CCCACGGCAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

46.9

-0.1

1.1

53.7

32.6

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

31.3

-1.3

2.5

43.98

46.4

Associated Gene:

Gene:

AMT

Ensembl Gene ID:

ENSAPLG00000023879

Chromosome:

PEDO01014130.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027527

21 - 4026

4006

ENSAPLT00000024233

21 - 4026

4006