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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_10971_11936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10971 - 11936

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGGCG

5'SS Class:

major

3'SS Sequence:

CTTCCCTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTAATAATG

Flanking Amino Acid:

RPCDISRILQVSNGCVSKIL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.8

39.1

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

77.7

0.62

0.9

69.6

35.7

Minor 5ss

23.4

-3.1

3.3

29.4

43.5

Minor BPS

49.7

-0.1

1.9

62.17

39.6

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038059

1458 - 12234

10777