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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_2283_2996_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2283 - 2996

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

ACTCAATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCCAT

U12 Branch Point Sequence:

TCCCACTCAATT

Flanking Amino Acid:

ADGHLWHHFHRSHFPWSVSS

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

75.7

34.4

Major BPS

69.5

0.49

1.2

78.7

34.9

Major PPT

74.8

0.56

0.9

70.1

39.5

Minor 5ss

27.6

-2.6

34.8

41.6

Minor BPS

49.9

0.07

1.8

66.59

44.2

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038059

1458 - 12234

10777

ENSAPLT00000005123

1458 - 12234

10777