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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_3149_4941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3149 - 4941

Intron Length:

1793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCG

5'SS Class:

major

3'SS Sequence:

TTTGCTGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

GGATGCTTAACG

Flanking Amino Acid:

FTMANNLPMQPPVPSQTSSY

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

65.1

40.7

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

0.56

0.9

69.4

36.8

Minor 5ss

30.8

-2.2

2.8

34.7

Minor BPS

59.7

0.17

1.9

62.15

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005123

1458 - 12234

10777

ENSAPLT00000038059

1458 - 12234

10777