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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01014152.1_5316_5596_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5316 - 5596

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGT

5'SS Class:

major

3'SS Sequence:

GCTGTGCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

ATGCCTACAAAA

Flanking Amino Acid:

KIDLPEARIQVWFSNRRAKW

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.9

44.1

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

72.3

0.5

61.5

44.5

Minor 5ss

32.3

-2

3.5

48.9

46.9

Minor BPS

-0.4

1.8

54.13

37.7

Associated Gene:

Gene:

PAX6

Ensembl Gene ID:

ENSAPLG00000004928

Chromosome:

PEDO01014152.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038059

1458 - 12234

10777

ENSAPLT00000005123

1458 - 12234

10777